Naruto Path of the Ninja 2 (thought it just uses the characters)
Naruto Ultimate Ninja Storm!!! --Greatest Anime based video game ever! High production values, great fighting and it stars the number one knuckleheaded ninja!
Yugioh Eternal Duelist Soul
Yugioh Dungeon Dice Monsters
Yugioh World Champtionship 2007: Stairway to the Destined Duel
Yugioh World Champtionship 2008
Yugioh GX: Tag Force
Yugioh GX: Tag Force 2
What can I say, I love my Yugioh card games. These were definitely the best ones and they never got old. I still need to finish Tag Force 2!